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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015953756.1_cds_XP_016492821.1_82994
CDS Infomation

[gene=LOC107812275] [db_xref=GeneID:107812275] [protein=ATP-dependent 6-phosphofructokinase 5, chloroplastic-like] [protein_id=XP_016492821.1] [location=complement(join(7974..8141,8264..8392,9331..9411,10521..10625,10713..10829,11395..11535,11950..12024,12136..12237,12431..12526,12640..12751,13406..13479,15329..15419,16363..16688))] [gbkey=CDS]
Sequence

ATGGAGTCGCTTTCGCCGGCGATCGGACAGAAAGCGATTCTACGGTATACGACTACTCAC
AGCGATCACGATCTCTTTTTAAGTTCCGTTAGGTTAAGAACTGTACGGAATCCGAGCAGA
GTTAGCCGGAGATTGAGAATTCGAGTGCAAGCTAAAAACGGAGCCTCCGAAAATGCTGCC
GGCGGCGGCGGCGGCATCGATTTTAGTGATCCTAATTGGAAGTTGAAGTATCAGAGAGAA
TTTGAGGCTCGTTTTAATATTCCTCATATTACTGATGTATTTCCTGACGCCGTTGAGTAT
CCTTCCACTTTTTGTCTTAAAATGAGGACTCCAGTATCTGAGGAGTTTGCAGAAGGTTAC
CCTTCAGATGAAAAATGGCATGGTTACATTAATAATAATGACAGAGTACTGCTTAAAGTA
ATTAATTATTCGTCCCCAACATCTGCTGGTGCTGAGTGCATTGATTCCAATTGTTCATGG
GTAGAGCAATGGGTTCACCGTGCTGGTCCTCGAGAGAAAATATATTTCAAGCCAGAAGAG
GTGAAAGCAGCAATTGTAACTTGTGGTGGACTTTGCCCTGGGCTTAATGATGTTATTCGA
CAGATAGTTATCACCCTTGAGATATATGGAGTGAAGAAAATTGTGGGAATTCCTTTTGGA
TATCGTGGGTTTTCAGAAAAAGATTTAGCCGAAATGCCATTATCCAGGAAAGTGGTGCAA
AATATCCATCTTTCCGGGGGAAGCTTGCTGGGAGTATCACGTGGAGGACCTAAAGTTAGT
GACATTGTGGACAGCATCCAGGAAAGAGGAATCAACATGCTCTTTGTGCTGGGTGGAAAT
GGCACACATGCTGGTGCAAATGCAATCCATGACGAGTGCCGTAAAAGACGTATGAAGGTG
GCTGTAGTTGGTGTGCCAAAAACTATAGACAACGATATTATGCTTATGGATAAGACATTT
GGTTTTGATACTGCTGTTGAAGAAGCGCAGAGAGCCATTAATTCTGCTTACATTGAGGCA
CATAGTGCGTACCGTGGTATTGGAATTGTGAAGTTGATGGGCCGTAGTAGTGGGTTTATA
GCTATGCAAGCATCCCTAGCTAGTGGACAAATAGACATATGCTTGATTCCAGAGGTGCCT
TTTAATCTGCATGGCCCACACGGTGTACTGAGGCATCTAAAATATCTGCTCGAGACTAAG
GGATCAGCTGTGGTTTGTGCAGCAGAGGGAGCTGGGCAGGATTTCCTCGAGAAAACCAAT
GCAAAAGATGCATCTGGAAATGCTGTACTTGGAGACATTGGTGTTTATTTGCAACAAGAG
ATTAAAAAGTACTTCAAGGAGATGGGAGAGACATCCGATGTGAAATACATTGATCCTACT
TACATGATCCGTGCATGCCGTGCTAATGCTTCAGATGGAATTCTGTGCACGGTACTTGGA
CAAAATGCTGTTCACGGTGCATTTGCTGGATATAGTGGTATCACAGTGGGTATATGCAAT
ACTCATTATGTCTACTTTCCAATTCCAGAAGTCATCTCTAAACCCAGGGTTGTGGATCCT
AACAGCCGCATGTGGCATCGTTGCTTGACATCCACAGGCCAGCCAGATTTTCTTTAA

Peptide Sequence

PEP ID

XP_016492821.1
PEP Infomation

PREDICTED: ATP-dependent 6-phosphofructokinase 5, chloroplastic-like [Nicotiana tabacum]
Sequence

MESLSPAIGQKAILRYTTTHSDHDLFLSSVRLRTVRNPSRVSRRLRIRVQAKNGASENAA
GGGGGIDFSDPNWKLKYQREFEARFNIPHITDVFPDAVEYPSTFCLKMRTPVSEEFAEGY
PSDEKWHGYINNNDRVLLKVINYSSPTSAGAECIDSNCSWVEQWVHRAGPREKIYFKPEE
VKAAIVTCGGLCPGLNDVIRQIVITLEIYGVKKIVGIPFGYRGFSEKDLAEMPLSRKVVQ
NIHLSGGSLLGVSRGGPKVSDIVDSIQERGINMLFVLGGNGTHAGANAIHDECRKRRMKV
AVVGVPKTIDNDIMLMDKTFGFDTAVEEAQRAINSAYIEAHSAYRGIGIVKLMGRSSGFI
AMQASLASGQIDICLIPEVPFNLHGPHGVLRHLKYLLETKGSAVVCAAEGAGQDFLEKTN
AKDASGNAVLGDIGVYLQQEIKKYFKEMGETSDVKYIDPTYMIRACRANASDGILCTVLG
QNAVHGAFAGYSGITVGICNTHYVYFPIPEVISKPRVVDPNSRMWHRCLTSTGQPDFL

Transcript Sequence

Gene sequence data has not been registered.